UMAP - Learn Data Science with Travis

Biologists, stop putting UMAP plots in your papers

Simply Statistics

The UMAP craze in singe cell RNA-Seq Single-cell RNA sequencing (scRNA-seq) has become one of the most widely used technologies in basic biology. With the rise of scRNA-seq, the use of UMAP has becom...

UMAP Dimensionality Reduction — An Incredibly Robust Machine Learning Algorithm

Towards Data Science

How does Uniform Manifold Approximation and Projection (UMAP) work, and how to use it in Python

On the Validating UMAP Embeddings

Towards Data Science

There is not a large body of practical work on validating Uniform Manifold Approximation and Projection (UMAP). In this blog post, I will show you a real example, in hopes to provide an additional…

How to Analyze 100-Dimensional Data with UMAP in Breathtakingly Beautiful Ways

Towards Data Science

Learn to reduce dimensionality and visualize 100-dimensional datasets with UMAP by creating point clouds and connectivity plots and really "see" your data.

How to Use UMAP For Much Faster And Effective Outlier Detection

Towards Data Science

Let’s catch those high-dimensional outliers Continue reading on Towards Data Science

The AiEdge+: T-SNE and UMAP - Dimensionality Reduction

The AiEdge Newsletter

If you want to impress your friends at Data Science dinner parties with beautiful plots, t-SNE and UMAP are the way to go! These are significant dimensionality reduction techniques widely used in data...

Nmap

Codecademy

Nmap (Network Mapper) is a free, open-source utility for analyzing network security. It is a popular tool for ethical hacking and is used for network discovery and security auditing. With Nmap, a cybe...

The New AI Gold Rush (Pan Provided!)

Level Up Coding

UMAP is short-changed as being characterized as a dimensionality reduction manifold learning technique. While being technically correct, it is better characterized as a transdimensional manifold…

Why you should not rely on t-SNE, UMAP or TriMAP

Towards Data Science

Dimensionality reduction techniques such as t-SNE¹, UMAP², and TriMap³ are ubiquitous within the field of data science, and given their impressive visual performance (combined with ease of use), they…...

How Exactly UMAP Works

Towards Data Science

This is the twelfth post in the column Mathematical Statistics and Machine Learning for Life Sciences where I try to cover analytical techniques common for Bioinformatics, Biomedicine, Genetics etc…

How to Program UMAP from Scratch

Towards Data Science

This is the thirteenth article of my column Mathematical Statistics and Machine Learning for Life Sciences where I try to explain some mysterious analytical techniques used in Bioinformatics…

Why UMAP is Superior over tSNE

Towards Data Science

This is the fourteenth post from the Mathematical Statistics and Machine Learning for Life Sciences column, where I try to explain in a simple way some mysterious analytical techniques used in…